Casadio R.; Calabrese R.; Capriotti E.; Compiani M.; Fariselli P.; Marani P.; Montanucci L.; Martelli P.L.; Rossi I.; Tasco G., Machine learning and the prediction of protein structure: the state of the art, in: Modern information processing -From theory to applications-, AMSTERDAM, Elsevier, 2006, pp. 359 - 370 (Modern information processing -From theory to applications-) [Chapter or essay]
S. Fermani; F. Sparla; G. Falini; Martelli, P. L.; M. Zaffagnini; A. Ripamonti; R. Casadio; P. Pupillo; Trost, P. B.; L. Martelli, Merging crystallography, site-directed mutagenesis and molecular modelling to unravel the regulatory mechanism of photosynthetic Gapdh, in: Abstracts, s.l, s.n, 2006, pp. 149 - 149 (atti di: 23rd European Meeting of Crystallography., Leuven (Belgio), 6-11 agosto 2006) [Abstract]
Amico M.; Finelli M.; Rossi I.; Zauli A.; Elofsson A.; Viklund H.; von Heijne G.; Jones D.; Krogh A.; Fariselli P.; Martelli P.L.; Casadio R., PONGO: a web server for multiple predictions of all-alpha transmembrane proteins, «NUCLEIC ACIDS RESEARCH», 2006, 34, pp. W169 - W172 [Scientific article]
Occhipinti E.; Bec N.; Gambirasio B.; Baietta G.; Martelli PL.; Casadio R.; Balny C.; Lange R.; Tortora P., Pressure and temperature as tools for investigating the role of individual non-covalent interactions in enzymatic reactions: Sulfolobus solfataricus carboxypeptidase as a model enzyme, «BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS», 2006, 1764, pp. 563 - 572 [Scientific article]
Fariselli P.; Martelli P.L.; Casadio R., A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins, «BMC BIOINFORMATICS», 2005, 6(Suppl 4) S12 [Scientific article]
Casadio R.; Fariselli P.; Martelli PL., How many membrane proteins in the human genome?, in: Bionformatics ITalian Society
BITS 2005
Conference Proceedings, MILANO, Studio Pistocchi sas, 2005, pp. 20 - 20 (atti di: BITS 2005, Milano, 17-19/3/2005) [Abstract]
Gianni, Tatiana; Martelli, PIER LUIGI; Casadio, Rita; Campadelli, MARIA GABRIELLA, The ectodomain of herpes simplex virus glycoprotein H contains a membrane alpha-helix with attributes of an internal fusion peptide, positionally conserved in the herpesviridae family., «JOURNAL OF VIROLOGY», 2005, 79, pp. 2931 - 2940 [Scientific article]
Fariselli P.; Martelli PL.; Casadio R., The posterior Viterbi: a new decoding algorithm for Hidden Markov Models, in: Bioinformatics ITalian Society
BITS 2005
Conference Proceedings, MILANO, Studio Pistocchi sas, 2005, pp. 37 - 37 (atti di: BITS 2005, Milano, 17-19/3/2005) [Abstract]
Fariselli P.; Finelli M.; Rossi I.; Amico M.; Zauli A.; Martelli P.L.; Casadio R., TRAMPLE: the transmembrane protein labelling environment, «NUCLEIC ACIDS RESEARCH», 2005, 33, pp. W198 - W201 [Scientific article]
Marani P.; Martelli PL.; von Heijne G.; Finocchiaro G.; Fariselli P.; Casadio R., Annotazione di nuove proteine della membrana esterna di E.coli K12, in: Proceedings della Scuola Nazionale di Biofisica, XII ciclo: “Proteomica e Biofisica", s.l, s.n, 2004, pp. 46 - 46 (atti di: Scuola Nazionale di Biofisica, XII ciclo: “Proteomica e Biofisica", Bressanone (BZ), 13-15/9/2004) [Abstract]
Durante, D.; Casadio, Rita; Martelli, PIER LUIGI; Tasco, Gianluca; Portaccio, M.; DE LUCA, P.; Bencivenga, U.; Rossi, S.; DI MARTINO, S.; Grano, V.; Diano, N.; Mita, D. G., Isothermal and non-isothermal bioreactors in the detoxification of waste waters polluted by aromatic compounds by means of immobilised laccase from Rhus vernicifera, «JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC», 2004, 27, pp. 191 - 206 [Scientific article]
CASADIO R.; CALABRESE R.; CAPRIOTTI E.; COMPIANI M.; FARISELLI P.; MARANI P.; MONTANUCCI L.; MARTELLI PL.; ROSSI I.; TASCO G., Machine learning and the prediction of protein structure: the state of the art, in: Proceedings of the 10th International Conference on Information Processing and Management of Uncertainty in Knowledge-Based Systems, ROMA, La Sapienza, 2004, pp. 933 - 940 (atti di: 10th Int. Conf. on Information Processing and Management of Uncertainty in Knowledge-Based Systems, Perugia, 4-9/7/2004) [Contribution to conference proceedings]
F. Sparla; S. Fermani; P.L. Martelli; M. Zaffagnini; G. Falini; A. Ripamonti; R. Casadio; P. Trost, Merging crystallography, site-directed mutagenesis and molecular modelling to unravel the regulatory mechanism of photosynthetic GAPDH, in: Proceedings del Convegno FISV, s.l, s.n, 2004, pp. 22 - 22 (atti di: Convegno FISV, Riva del Garda, 30/09-3/10/2004) [Abstract]
Martelli, PIER LUIGI; Fariselli, Piero; Casadio, Rita, Prediction of disulfide-bonded cysteines in proteomes with a hidden neural network, «PROTEOMICS», 2004, 4, pp. 1665 - 1671 [Scientific article]
Martelli P.L.; Fariselli P.; Casadio R., An ENSEMBLE machine learning approach for the prediction of all-alpha membrane proteins, «BIOINFORMATICS», 2003, 19, pp. 205 - 211 [Scientific article]
