Foto del docente

Pier Luigi Martelli

Full Professor

Department of Pharmacy and Biotechnology

Academic discipline: BIO/10 Biochemistry

Publications

Manfredi M.; Savojardo C.; Martelli P.L.; Casadio R., DeepREx-WS: A web server for characterising protein–solvent interaction starting from sequence, «COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL», 2021, 19, pp. 5791 - 5799 [Scientific article]Open Access

Walsh I.; Fishman D.; Garcia-Gasulla D.; Titma T.; Pollastri G.; Capriotti E.; Casadio R.; Capella-Gutierrez S.; Cirillo D.; Del Conte A.; Dimopoulos A.C.; Del Angel V.D.; Dopazo J.; Fariselli P.; Fernandez J.M.; Huber F.; Kreshuk A.; Lenaerts T.; Martelli P.L.; Navarro A.; Broin P.O.; Pinero J.; Piovesan D.; Reczko M.; Ronzano F.; Satagopam V.; Savojardo C.; Spiwok V.; Tangaro M.A.; Tartari G.; Salgado D.; Valencia A.; Zambelli F.; Harrow J.; Psomopoulos F.E.; Tosatto S.C.E., DOME: recommendations for supervised machine learning validation in biology, «NATURE METHODS», 2021, 18, pp. 1122-1127 - 1127 [Scientific article]Open Access

Babbi G.; Savojardo C.; Martelli P.L.; Casadio R., Huntingtin: A protein with a peculiar solvent accessible surface, «INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES», 2021, 22, Article number: 2878 , pp. 1 - 12 [Scientific article]Open Access

Savojardo C.; Babbi G.; Martelli P.L.; Casadio R., Mapping OMIM Disease–Related Variations on Protein Domains Reveals an Association Among Variation Type, Pfam Models, and Disease Classes, «FRONTIERS IN MOLECULAR BIOSCIENCES», 2021, 8, Article number: 617016 , pp. 1 - 9 [Scientific article]Open Access

Savojardo C.; Martelli P.L.; Casadio R.; Fariselli P., On the critical review of five machine learning-based algorithms for predicting protein stability changes upon mutation, «BRIEFINGS IN BIOINFORMATICS», 2021, 22, pp. 601 - 603 [Scientific article]Open Access

Savojardo, Castrense; Manfredi, Matteo; Martelli, Pier Luigi; Casadio, Rita, Solvent Accessibility of Residues Undergoing Pathogenic Variations in Humans: From Protein Structures to Protein Sequences, «FRONTIERS IN MOLECULAR BIOSCIENCES», 2021, 7, Article number: 626363 , pp. 1 - 9 [Scientific article]Open Access

Ledwaba M.B.; Glover B.A.; Matle I.; Profiti G.; Martelli P.L.; Casadio R.; Zilli K.; Janowicz A.; Marotta F.; Garofolo G.; van Heerden H., Whole genome sequence analysis of brucella abortus isolates from various regions of South Africa, «MICROORGANISMS», 2021, 9, Article number: 570 , pp. 1 - 14 [Scientific article]Open Access

Turri, Valentina; Latinovic, Olga S.; Bonafè, Massimiliano; Toyang, Ngeh; Parigi, Maria; Calassanzio, Matteo; Martelli, Pier Luigi; Vagheggini, Alessandro; Abbati, Giulia; Sarnelli, Anna; Casadio, Rita; Ratti, Claudio; Massi, Paola; Schoelz, James E.; Salvato, Maria S.; Piccinini, Filippo; Martinelli, Giovanni, Cauliflower Mosaic Virus TAV, a Plant Virus Protein That Functions like Ribonuclease H1 and is Cytotoxic to Glioma Cells, «BIOMED RESEARCH INTERNATIONAL», 2020, 2020, Article number: 7465242 , pp. 1 - 10 [Scientific article]Open Access

Savojardo C.; Bruciaferri N.; Tartari G.; Martelli P.L.; Casadio R., DeepMito: accurate prediction of protein sub-mitochondrial localization using convolutional neural networks, «BIOINFORMATICS», 2020, 36, pp. 56 - 64 [Scientific article]Open Access

Babbi G.; Baldazzi D.; Savojardo C.; Martelli P.L.; Casadio R., Highlighting human enzymes active in different metabolic pathways and diseases: The case study of EC 1.2.3.1 and EC 2.3.1.9, «BIOMEDICINES», 2020, 8, Article number: 250 , pp. 250 - 262 [Scientific article]Open Access

Savojardo C.; Martelli P.L.; Tartari G.; Casadio R., Large-scale prediction and analysis of protein sub-mitochondrial localization with DeepMito, «BMC BIOINFORMATICS», 2020, 21, Article number: 266 , pp. 266 - 278 [Scientific article]Open Access

Samuele Bovo, Pier Luigi Martelli, Pietro Di Lena, Rita Casadio, NETGE-PLUS, 2020. [Software]

Bovo S.; Martelli P.L.; Di Lena P.; Casadio R., NETGE-PLUS: Standard and Network-Based Gene Enrichment Analysis in Human and Model Organisms, «JOURNAL OF PROTEOME RESEARCH», 2020, 19, pp. 2873 - 2878 [Scientific article]Open Access

Savojardo, Castrense; Martelli, Pier Luigi; Casadio, Rita, Protein–Protein Interaction Methods and Protein Phase Separation, «ANNUAL REVIEW OF BIOMEDICAL DATA SCIENCE», 2020, 3, pp. 89 - 112 [Scientific article]

Montanucci, Ludovica; Martelli, Pier Luigi; Ben-Tal, Nir; Fariselli, Piero, A natural upper bound to the accuracy of predicting protein stability changes upon mutations, «BIOINFORMATICS», 2019, 35, pp. 1513 - 1517 [Scientific article]

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