Foto del docente

Federico Manuel Giorgi

Senior assistant professor (fixed-term)

Department of Pharmacy and Biotechnology

Academic discipline: BIO/13 Experimental Biology

Publications

Laura D. Gamble, Stefania Purgato, Jayne Murray, Lin Xiao, Denise M. T. Yu, Kimberley M. Hanssen, Federico M. Giorgi, Daniel R. Carter, Andrew J. Gifford, Emanuele Valli, Giorgio Milazzo, Alvin Kamili, Chelsea Mayoh, Bing Liu, Georgina Eden, Sara Sarraf, Sophie Allan, Simone Di Giacomo, Claudia L. Flemming, Amanda J. Russell, Belamy B. Cheung, Andre Oberthuer, Wendy B. London, Matthias Fischer, Toby N. Trahair, Jamie I. Fletcher, Glenn M. Marshall, David S. Ziegler, Michael D. Hogarty, Mark R. Burns, Giovanni Perini, Murray D. Norris, and Michelle Haber, Inhibition of polyamine synthesis and uptake reduces tumor progression and prolongs survival in mouse models of neuroblastoma, «SCIENCE TRANSLATIONAL MEDICINE», 2019, 11, pp. 1 - 12 [Scientific article]

Mercatelli D.; Ray F.; Giorgi F.M., Pan-cancer and single-cell modelling of genomic alterations through gene expression, «FRONTIERS IN GENETICS», 2019, 10, pp. 671 - 683 [Scientific article]

Holding, Andrew N.; Giorgi, Federico M.; Donnelly, Amanda; Cullen, Amy E.; Nagarajan, Sankari; Selth, Luke A.; Markowetz, Florian, VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer, «GENOME BIOLOGY», 2019, 20, pp. 1 - 16 [Scientific article]

Cesana, Marcella; Guo, Michael H.; Cacchiarelli, Davide; Wahlster, Lara; Barragan, Jessica; Doulatov, Sergei; Vo, Linda T.; Salvatori, Beatrice; Trapnell, Cole; Clement, Kendell; Cahan, Patrick; Tsanov, Kaloyan M.; Sousa, Patricia M.; Tazon-Vega, Barbara; Bolondi, Adriano; Giorgi, Federico M.; Califano, Andrea; Rinn, John L.; Meissner, Alexander; Hirschhorn, Joel N.; Daley, George Q., A CLK3-HMGA2 Alternative Splicing Axis Impacts Human Hematopoietic Stem Cell Molecular Identity throughout Development, «CELL STEM CELL», 2018, 22, pp. 575 - 588 [Scientific article]

Giuntoli, Beatrice; Shukla, Vinay; Maggiorelli, Federica; Giorgi, Federico M.; Lombardi, Lara; Perata, Pierdomenico; Licausi, Francesco, Age-dependent regulation of ERF-VII transcription factor activity in Arabidopsis thaliana, «PLANT, CELL AND ENVIRONMENT», 2017, 40, pp. 2333 - 2346 [Scientific article]

Sibout, Richard*; Proost, Sebastian; Hansen, Bjoern Oest; Vaid, Neha; Giorgi, Federico M.; Ho-Yue-Kuang, Severine; Legée, Frédéric; Cézart, Laurent; Bouchabké-Coussa, Oumaya; Soulhat, Camille; Provart, Nicholas; Pasha, Asher; Le Bris, Philippe; Roujol, David; Hofte, Herman; Jamet, Elisabeth; Lapierre, Catherine; Persson, Staffan; Mutwil, Marek, Expression atlas and comparative coexpression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon, «NEW PHYTOLOGIST», 2017, 215, pp. 1009 - 1025 [Scientific article]

Lachmann, Alexander; Giorgi, Federico M.; Lopez, Gonzalo; Califano, Andrea*, ARACNe-AP: Gene network reverse engineering through adaptive partitioning inference of mutual information, «BIOINFORMATICS», 2016, 32, pp. 2233 - 2235 [Scientific article]

Giorgi, Federico M; Lopez, Gonzalo; Woo, Jung H; Bisikirska, Brygida; Califano, Andrea; Bansal, Mukesh, Correction: Inferring Protein Modulation from Gene Expression Data Using Conditional Mutual Information, «PLOS ONE», 2016, 11, pp. 42 - 54 [Scientific article]

Lachmann, Alexander; Giorgi, Federico M.; Alvarez, Mariano J.; Califano, Andrea, Detection and removal of spatial bias in multiwell assays, «BIOINFORMATICS», 2016, 32, pp. 1959 - 1965 [Scientific article]

Alvarez, Mariano J.; Shen, Yao; Giorgi, Federico M; Lachmann, Alexander; Ding, B Belinda; Hilda Ye, B.; Califano, Andrea, Functional characterization of somatic mutations in cancer using network-based inference of protein activity, «NATURE GENETICS», 2016, 48, pp. 838 - 847 [Scientific article]

Sepulveda, Jorge L.; Gutierrez-Pajares, Jorge L.; Luna, Aesis; Yao, Yuan; Tobias, John W.; Thomas, Steven; Woo, Yanghee; Giorgi, Federico; Komissarova, Elena V.; Califano, Andrea; Wang, Timothy C.; Sepulveda, Antonia R.*, High-definition CpG methylation of novel genes in gastric carcinogenesis identified by next-generation sequencing, «MODERN PATHOLOGY», 2016, 29, pp. 182 - 193 [Scientific article]

Hughes, James M.; Salvatori, Beatrice; Giorgi, Federico M.; Bozzoni, Irene; Fatica, Alessandro*, CEBPA-regulated lncRNAs, new players in the study of acute myeloid leukemia, «JOURNAL OF HEMATOLOGY & ONCOLOGY», 2014, 7, pp. 69 - 76 [Scientific article]

Giorgi, Federico M.; Lopez, Gonzalo; Woo, Jung H.; Bisikirska, Brygida; Califano, Andrea; Bansal, Mukesh, Inferring protein modulation from gene expression data using conditional mutual information, «PLOS ONE», 2014, 9, pp. 569 - 578 [Scientific article]

Tosetti, Roberta; Tardelli, Francesca; Tadiello, Alice; Zaffalon, Valerio; Giorgi, Federico M.; Guidi, Lucia; Trainotti, Livio; Bonghi, Claudio; Tonutti, Pietro*, Molecular and biochemical responses to wounding in mesocarp of ripe peach (Prunus persica L. Batsch) fruit, «POSTHARVEST BIOLOGY AND TECHNOLOGY», 2014, 90, pp. 40 - 51 [Scientific article]

Del Fabbro, Cristian; Scalabrin, Simone; Morgante, Michele; Giorgi, Federico M., An extensive evaluation of read trimming effects on illumina NGS data analysis, «PLOS ONE», 2013, 8, pp. 1932 - 1943 [Scientific article]