Peiying Cai; Mark D Robinson; Simone Tiberi, DESpace: spatially variable gene detection via differential expression testing of spatial clusters, «BIOINFORMATICS», 2024, 40, Article number: btae027 , pp. 1 - 10 [Scientific article]Open Access
Simone Tiberi; Helena L Crowell; Pantelis Samartsidis; Lukas M Weber; Mark D Robinson, distinct: a novel approach to differential distribution analyses, «THE ANNALS OF APPLIED STATISTICS», 2023, 17, pp. 1681 - 1700 [Scientific article]Open Access
Philipp Weiler; Koen Van den Berge; Kelly Street; Simone Tiberi, A guide to trajectory inference and RNA velocity, in: Single Cell Transcriptomics: Methods and Protocols, New York, Springer Publishing, 2022, pp. 269 - 292 [Chapter or essay]
Rachel M. Miller, Ben T. Jordan, Madison M. Mehlferber, Erin D. Jeffery, Christina Chatzipantsiou, Simi Kaur, Robert J. Millikin, Yunxiang Dai, Simone Tiberi, Peter J. Castaldi, Michael R. Shortreed, Chance John Luckey, Ana Conesa, Lloyd M. Smith, Anne Deslattes Mays, Gloria M. Sheynkman, Enhanced protein isoform characterization through long-read proteogenomics, «GENOME BIOLOGY», 2022, 23, Article number: 69 , pp. 1 - 28 [Scientific article]Open Access
Pantano F.; Zalfa F.; Iuliani M.; Simonetti S.; Manca P.; Napolitano A.; Tiberi S.; Russano M.; Citarella F.; Foderaro S.; Vulpis E.; Zingoni A.; Masuelli L.; Bei R.; Ribelli G.; Del Re M.; Danesi R.; Vincenzi B.; Perrone G.; Tonini G.; Santini D., Large−Scale Profiling of Extracellular Vesicles Identified miR−625−5p as a Novel Biomarker of Immunotherapy Response in Advanced Non−Small−Cell Lung Cancer Patients, «CANCERS», 2022, 14, Article number: 2435 , pp. 1 - 15 [Scientific article]Open Access
Christian Sailer; Simone Tiberi; Bernhard Schmid; JÃrg StÃcklin; Ueli Grossniklaus, Apomixis and genetic background affect distinct traits in Hieracium pilosella L. grown under competition, «BMC BIOLOGY», 2021, 19, pp. 1 - 10 [Scientific article]Open Access
Cavallaro, Massimo; Walsh, Mark D.; Jones, Matt; Teahan, James; Tiberi, Simone; Finkenstädt, Bärbel; Hebenstreit, Daniel, 3’-5’ crosstalk contributes to transcriptional bursting, «GENOME BIOLOGY», 2021, 22, Article number: 56 , pp. 1 - 20 [Scientific article]Open Access
Tiberi S.; Robinson M.D., BANDITS: Bayesian differential splicing accounting for sample-to-sample variability and mapping uncertainty, «GENOME BIOLOGY», 2020, 21, Article number: 69 , pp. 1 - 13 [Scientific article]Open Access
Van den Berge, Koen; Hembach, Katharina M.; Soneson, Charlotte; Tiberi, Simone; Clement, Lieven; Love, Michael I.; Patro, Rob; Robinson, Mark D., RNA Sequencing Data: Hitchhiker's Guide to Expression Analysis, «ANNUAL REVIEW OF BIOMEDICAL DATA SCIENCE», 2019, 2, pp. 139 - 173 [Scientific article]
Lee A.; Tiberi S.; Zanella G., Unbiased approximations of products of expectations, «BIOMETRIKA», 2019, 106, pp. 708 - 715 [Scientific article]
Tiberi S.; Scarpa B.; Sartori N., A composite likelihood approach to predict the sex of the baby, «STATISTICAL METHODS IN MEDICAL RESEARCH», 2018, 27, pp. 3386 - 3396 [Scientific article]
Tiberi S.; Walsh M.; Cavallaro M.; Hebenstreit D.; Finkenstadt B., Bayesian inference on stochastic gene transcription from flow cytometry data, «BIOINFORMATICS», 2018, 34, pp. i647 - i655 [Scientific article]
Lombardi, Augusto; Maggi, Stefano; Lo Russo, Marzia; Scopinaro, Francesco; Di Stefano, Domenica; Pittau, Maria Grazia; Tiberi, Simone; Amanti, Claudio, Non-Sentinel Lymph Node Metastases in Breast Cancer Patients with a Positive Sentinel Lymph Node: Validation of Five Nomograms and Development of a New Predictive Model, «TUMORI», 2011, 97, pp. 749 - 755 [Scientific article]
