Foto del docente

Emanuele Paci

Professore associato

Dipartimento di Fisica e Astronomia "Augusto Righi"

Settore scientifico disciplinare: FIS/07 FISICA APPLICATA (A BENI CULTURALI, AMBIENTALI, BIOLOGIA E MEDICINA)

Pubblicazioni

Rose R.J.; Verger D.; Daviter T.; Remaut H.; Paci E.; Waksman G.; Ashcroft A.E.; Radford S.E., Unraveling the molecular basis of subunit specificity in P pilus assembly by mass spectrometry, «PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA», 2008, 105, pp. 12873 - 12878 [articolo]

Morton V.L.; Friel C.T.; Allen L.R.; Paci E.; Radford S.E., The Effect of Increasing the Stability of Non-native Interactions on the Folding Landscape of the Bacterial Immunity Protein Im9, «JOURNAL OF MOLECULAR BIOLOGY», 2007, 371, pp. 554 - 568 [articolo]

Noronha M.; Lima J.C.; Paci E.; Santos H.; Macanita A.L., Tracking local conformational changes of ribonuclease A using picosecond time-resolved fluorescence of the six tyrosine residues, «BIOPHYSICAL JOURNAL», 2007, 92, pp. 4401 - 4414 [articolo]

Allen L.R.; Paci E., Transition states for protein folding using molecular dynamics and experimental restraints, «JOURNAL OF PHYSICS. CONDENSED MATTER», 2007, 19, Article number: 285211, pp. 1 - 15 [articolo]

Gsponer J.; Hopearuoho H.; Whittaker S.B.-M.; Spence G.R.; Moore G.R.; Paci E.; Radford S.E.; Vendruscolo M., Determination of an ensemble of structures representing the intermediate state of the bacterial immunity protein Im7, «PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA», 2006, 103, pp. 99 - 104 [articolo]

West D.K.; Olmsted P.D.; Paci E., Free energy for protein folding from nonequilibrium simulations using the Jarzynski equality, «THE JOURNAL OF CHEMICAL PHYSICS», 2006, 125, Article number: 204910, pp. 1 - 8 [articolo]

West D.K.; Paci E.; Olmsted P.D., Internal protein dynamics shifts the distance to the mechanical transition state, «PHYSICAL REVIEW E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS», 2006, 74, Article number: 061912, pp. 1 - 5 [articolo]

West D.K.; Brockwell D.J.; Olmsted P.D.; Radford S.E.; Paci E., Mechanical resistance of proteins explained using simple molecular models, «BIOPHYSICAL JOURNAL», 2006, 90, pp. 287 - 297 [articolo]

West D.K.; Olmsted P.D.; Paci E., Mechanical unfolding revisited through a simple but realistic model, «THE JOURNAL OF CHEMICAL PHYSICS», 2006, 124, Article number: 154909, pp. 1 - 8 [articolo]

Neelov I.M.; Adolf D.B.; McLeish T.C.B.; Paci E., Molecular dynamics simulation of dextran extension by constant force in single molecule AFM, «BIOPHYSICAL JOURNAL», 2006, 91, pp. 3579 - 3588 [articolo]

Seeber M.; Fanelli F.; Paci E.; Caflisch A., Sequential unfolding of individual helices of bacterioopsin observed in molecular dynamics simulations of extraction from the purple membrane, «BIOPHYSICAL JOURNAL», 2006, 91, pp. 3276 - 3284 [articolo]

Geierhaas C.D.; Best R.B.; Paci E.; Vendruscolo M.; Clarke J., Structural comparison of the two alternative transition states for folding of TI I27, «BIOPHYSICAL JOURNAL», 2006, 91, pp. 263 - 275 [articolo]

Curcio R.; Caflisch A.; Paci E., Change of the unbinding mechanism upon a mutation: A molecular dynamics study of an antibody-hapten complex, «PROTEIN SCIENCE», 2005, 14, pp. 2499 - 2514 [articolo]

Paci E.; Greene L.H.; Jones R.M.; Smith L.J., Characterization of the molten globule state of retinol-binding protein using a molecular dynamics simulation approach, «THE FEBS JOURNAL», 2005, 272, pp. 4826 - 4838 [articolo]

Cavalli A.; Vendruscolo M.; Paci E., Comparison of sequence-based and structure-based energy functions for the reversible folding of a peptide, «BIOPHYSICAL JOURNAL», 2005, 88, pp. 3158 - 3166 [articolo]

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