Capriotti E.; Fariselli P.; Rossi I.; Casadio R., Improving the quality of the predictions of protein stability changes upon mutation using a multi-class predictor, in: Conference Proceedings of the Bioinformatics ITalian Society BITS 2006, BARI, Bioinformatics ITalian Society, 2006, pp. 30 - 30 (atti di: Bioinformatics ITalian Society BITS 2006, Bologna, 28-29/04/2006) [Abstract]
Casadio R.; Fariselli P.; Margara L.; Medri F.; Vassura M., Improving the selection of close-native protein structures in decoy sets using a graph theory-based approach, in: Conference Proceedings of the Bioinformatics ITalian Society BITS 2006, BARI, Bioinformatics ITalian Society, 2006, pp. 32 - 32 (atti di: Bioinformatics ITalian Society BITS 2006, Bologna, 28-29/04/2006) [Abstract]
Casadio R.; Calabrese R.; Capriotti E.; Compiani M.; Fariselli P.; Marani P.; Montanucci L.; Martelli P.L.; Rossi I.; Tasco G., Machine learning and the prediction of protein structure: the state of the art, in: Modern information processing -From theory to applications-, AMSTERDAM, Elsevier, 2006, pp. 359 - 370 (Modern information processing -From theory to applications-) [Chapter or essay]
S. Fermani; F. Sparla; G. Falini; Martelli, P. L.; M. Zaffagnini; A. Ripamonti; R. Casadio; P. Pupillo; Trost, P. B.; L. Martelli, Merging crystallography, site-directed mutagenesis and molecular modelling to unravel the regulatory mechanism of photosynthetic Gapdh, in: Abstracts, s.l, s.n, 2006, pp. 149 - 149 (atti di: 23rd European Meeting of Crystallography., Leuven (Belgio), 6-11 agosto 2006) [Abstract]
Rossi I.; Casadio R., Metodi di apprendimento automatico per l’annotazione strutturale e funzionale di genomi, in: Atti del Convegno Calcolo ad Alte Prestazioni in Italia "CAPI 2006 Biocomputing", s.l, s.n, 2006(atti di: Convegno Calcolo ad Alte Prestazioni in Italia "CAPI 2006 Biocomputing", Milano, 16-17/10/06) [Abstract]
Marani P.; Wagner S.; Baars L.; Genevaux P.; De Gier JW.; Nilsson IM.; Casadio R.; von Heijne G., New Escherichia coli outer membrane proteins identified through prediction and experimental verification, «PROTEIN SCIENCE», 2006, 15, pp. 884 - 889 [Scientific article]
Calabrese R.; Capriotti E.; Casadio R., PhD-SNP, a web server for the prediction of human genetic diseases associated to single point protein mutation., in: Conference Proceedings of the VII Jornadas de Bioinformatica, s.l, s.n, 2006, pp. 175 - 175 (atti di: VII Jornadas de Bioinformatica, Zaragoza (Spain), 20-22/11/2006) [Abstract]
Amico M.; Finelli M.; Rossi I.; Zauli A.; Elofsson A.; Viklund H.; von Heijne G.; Jones D.; Krogh A.; Fariselli P.; Martelli P.L.; Casadio R., PONGO: a web server for multiple predictions of all-alpha transmembrane proteins, «NUCLEIC ACIDS RESEARCH», 2006, 34, pp. W169 - W172 [Scientific article]
Capriotti E.; Calabrese R.; Casadio R., Predicting the insurgence of human genetic diseases associated to single point protein mutations with Support Vector Machines and evolutionary information, «BIOINFORMATICS», 2006, 22, pp. 2729 - 2734 [Scientific article]
Occhipinti E.; Bec N.; Gambirasio B.; Baietta G.; Martelli PL.; Casadio R.; Balny C.; Lange R.; Tortora P., Pressure and temperature as tools for investigating the role of individual non-covalent interactions in enzymatic reactions: Sulfolobus solfataricus carboxypeptidase as a model enzyme, «BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS», 2006, 1764, pp. 563 - 572 [Scientific article]
Casadio R., Software systems for automatic annotation and discovery of pharmacologically-relevant proteins at the genome level., in: Official Catalogue of the 2nd Exhibition-Conference on Industrial Research, BOLOGNA, BolognaFiere, 2006, pp. 43 - 43 (atti di: Research to Business: research renews business, Bologna (Italy), 11-12/05/2006) [Abstract]
Capriotti E.; Casadio R., The evaluation of protein folding rate constant is improved by predicting the folding kinetic order with a SVM-based method, «WSEAS TRANSACTIONS ON BIOLOGY AND BIOMEDICINE», 2006, 3, pp. 304 - 310 [Scientific article]
Casadio R., Validation of methods for the protein topology prediction, in: Conference Proceedings of the 3rd BioSapiens Annual General Meeting, s.l, s.n, 2006(atti di: The 3rd BioSapiens Annual General Meeting, Barcelona, Spain, 27-29/03/2006) [Abstract]
Fariselli P.; Martelli P.L.; Casadio R., A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins, «BMC BIOINFORMATICS», 2005, 6(Suppl 4) S12 [Scientific article]
Casadio R.; Myers G., Algorithms in Bioinformatics: lecture notes in bioinformatics
Proceedings of the 5th International Workshop on algorithms in bioinformatics, BERLIN-HEIDELBERG, Springer-Verlag, 2005, pp. 436 (LNBI). [Editorship]
