Savojardo, Castrense; Martelli, Pier Luigi; Fariselli, Piero; Casadio, Rita, SChloro: directing Viridiplantae proteins to six chloroplastic sub-compartments, «BIOINFORMATICS», 2017, 33, pp. 347 - 353 [articolo]
Savojardo, Castrense; Martelli, Pier Luigi; Fariselli, Piero; Casadio, Rita, SChloro is a web-server to predict protein sub-chloroplastic localization in plants, 2017. [software]
Profiti, Giuseppe; Martelli, Pier Luigi; Casadio, Rita, The Bologna Annotation Resource (BAR 3.0): improving protein functional annotation, «NUCLEIC ACIDS RESEARCH», 2017, 45, pp. W285 - W290 [articolo]
Babbi, Giulia; Martelli, Pier Luigi; Profiti, Giuseppe; Bovo, Samuele; Savojardo, Castrense; Casadio, Rita, The eDGAR database of Disease-Gene Associations with annotated Relationships among genes, 2017. [banche dati]
Gregory Neils Puncher, Alessia Cariani, Elisabetta Cilli, Francesco Massari, Castrense Savojardo, Sara De Fanti, Agostino Leone, Pier Luigi Martelli, Andrea Luchetti, Barbara Mantovani, Rita Casadio, Arturo Morales, Vedat Onar, Nezir Yaşar Toker, Tom Moens, Fausto Tinti, The impact of fisheries on bluefin tuna (Thunnus thynnus) over two millennia (2nd century BC – 20th century AD): Genetic and genomic analyses of ancient tuna remains from the Mediterranean, Atlantic, and Black Seas, in: Fish and Fishing Communities. Understanding Ancient and Modern Fisheries through Archaeological Fish Remains, 2017, pp. 44 - 45 (atti di: ICAZ 19 FRWG, Fish and Fishing Communities. Understanding Ancient and Modern Fisheries through Archaeological Fish Remains, Stintino e Alghero, 1-7 Ottobre 2017) [atti di convegno-abstract]
Daneshjou, Roxana; Wang, Yanran; Bromberg, Yana; Bovo, Samuele; Martelli, Pier L; Babbi, Giulia; Pietro Di, Lena; Casadio, Rita; Edwards, Matthew; Gifford, David; Jones, David T; Sundaram, Laksshman; Bhat, Rajendra Rana; Xiaolin, Li; Pal, Lipika R.; Kundu, Kunal; Yin, Yizhou; Moult, John; Jiang, Yuxiang; Pejaver, Vikas; Pagel, Kymberleigh A.; Biao, Li; Mooney, Sean D.; Radivojac, Predrag; Shah, Sohela; Carraro, Marco; Gasparini, Alessandra; Leonardi, Emanuela; Giollo, Manuel; Ferrari, Carlo; Tosatto, Silvio C E; Bachar, Eran; Azaria, Johnathan R.; Ofran, Yanay; Unger, Ron; Niroula, Abhishek; Vihinen, Mauno; Chang, Billy; Wang, Maggie H; Franke, Andre; Petersen, Britt-Sabina; Pirooznia, Mehdi; Zandi, Peter; Mccombie, Richard; Potash, James B.; Altman, Russ B.; Klein, Teri E.; Hoskins, Roger A.; Repo, Susanna; Brenner, Steven E.; Morgan, Alexander A., Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges, «HUMAN MUTATION», 2017, 38, pp. 1182 - 1192 [articolo]Open Access
Jiang, Yuxiang; Oron, Tal Ronnen; Clark, Wyatt T.; Bankapur, Asma R.; D’Andrea, Daniel; Lepore, Rosalba; Funk, Christopher S.; Kahanda, Indika; Verspoor, Karin M.; Ben-Hur, Asa; Koo, Da Chen Emily; Penfold-Brown, Duncan; Shasha, Dennis; Youngs, Noah; Bonneau, Richard; Lin, Alexandra; Sahraeian, Sayed M. E.; Martelli, Pier Luigi; Profiti, Giuseppe; Casadio, Rita; Cao, Renzhi; Zhong, Zhaolong; Cheng, Jianlin; Altenhoff, Adrian; Skunca, Nives; Dessimoz, Christophe; Dogan, Tunca; Hakala, Kai; Kaewphan, Suwisa; Mehryary, Farrokh; Salakoski, Tapio; Ginter, Filip; Fang, Hai; Smithers, Ben; Oates, Matt; Gough, Julian; Törönen, Petri; Koskinen, Patrik; Holm, Liisa; Chen, Ching-Tai; Hsu, Wen-Lian; Bryson, Kevin; Cozzetto, Domenico; Minneci, Federico; Jones, David T.; Chapman, Samuel; Bkc, Dukka; Khan, Ishita K.; Kihara, Daisuke; Ofer, Dan; Rappoport, Nadav; Stern, Amos; Cibrian-Uhalte, Elena; Denny, Paul; Foulger, Rebecca E.; Hieta, Reija; Legge, Duncan; Lovering, Ruth C.; Magrane, Michele; Melidoni, Anna N.; Mutowo-Meullenet, Prudence; Pichler, Klemens; Shypitsyna, Aleksandra; Li, Biao; Zakeri, Pooya; Elshal, Sarah; Tranchevent, Léon-Charles; Das, Sayoni; Dawson, Natalie L.; Lee, David; Lees, Jonathan G.; Sillitoe, Ian; Bhat, Prajwal; Nepusz, Tamás; Romero, Alfonso E.; Sasidharan, Rajkumar; Yang, Haixuan; Paccanaro, Alberto; Gillis, Jesse; Sedeño-Cortés, Adriana E.; Pavlidis, Paul; Feng, Shou; Cejuela, Juan M.; Goldberg, Tatyana; Hamp, Tobias; Richter, Lothar; Salamov, Asaf; Gabaldon, Toni; Marcet-Houben, Marina; Supek, Fran; Gong, Qingtian; Ning, Wei; Zhou, Yuanpeng; Tian, Weidong; Falda, Marco; Fontana, Paolo; Lavezzo, Enrico; Toppo, Stefano; Ferrari, Carlo; Giollo, Manuel; Piovesan, Damiano; Tosatto, Silvio C.E.; del Pozo, Angela; Fernández, José M.; Maietta, Paolo; Valencia, Alfonso; Tress, Michael L.; Benso, Alfredo; Di Carlo, Stefano; Politano, Gianfranco; Savino, Alessandro; Rehman, Hafeez Ur; Re, Matteo; Mesiti, Marco; Valentini, Giorgio; Bargsten, Joachim W.; van Dijk, Aalt D. J.; Gemovic, Branislava; Glisic, Sanja; Perovic, Vladmir; Veljkovic, Veljko; Veljkovic, Nevena; Almeida-e-Silva, Danillo C.; Vencio, Ricardo Z. N.; Sharan, Malvika; Vogel, Jörg; Kansakar, Lakesh; Zhang, Shanshan; Vucetic, Slobodan; Wang, Zheng; Sternberg, Michael J. E.; Wass, Mark N.; Huntley, Rachael P.; Martin, Maria J.; O’Donovan, Claire; Robinson, Peter N.; Moreau, Yves; Tramontano, Anna; Babbitt, Patricia C.; Brenner, Steven E.; Linial, Michal; Orengo, Christine A.; Rost, Burkhard; Greene, Casey S.; Mooney, Sean D.; Friedberg, Iddo; Radivojac, Predrag, An expanded evaluation of protein function prediction methods shows an improvement in accuracy, «GENOME BIOLOGY», 2016, 17, Article number: 184, pp. 1 - 19 [articolo]Open Access
Sazzini, Marco; De Fanti, Sara; Cherubini, Anna; Quagliariello, Andrea; Profiti, Giuseppe; Martelli, Pier Luigi; Casadio, Rita; Ricci, Chiara; Campieri, Massimo; Lanzini, Alberto; Volta, Umberto; Caio, Giacomo; Franceschi, Claudio; Spisni, Enzo; Luiselli, Donata, Ancient pathogen-driven adaptation triggers increased susceptibility to non-celiac wheat sensitivity in present-day European populations, «GENES & NUTRITION», 2016, 11, pp. 1 - 11 [articolo]
Bovo, Samuele; Di Lena, Pietro; Martelli, Pier Luigi; Fariselli, Piero; Casadio, Rita, From protein variations to biological processes and pathways with NET-GE, in: .Genomics and Computational Biology, Kernel Press UG (haftungsbeschränkt), 2016, pp. 1 - 2 (atti di: IWWBIO 2016, 4th International Work-Conference on Bioinformatics and Biomedical Engineering, Granada, Spain, 20-22 April 2016) [atti di convegno-abstract]
Linguiti, Giovanna; Antonacci, Rachele; Tasco, Gianluca; Grande, Francesco; Casadio, Rita; Massari, Serafina; Castelli, Vito; Consiglio, Arianna; Lefranc, Marie-Paule; Ciccarese, Salvatrice, Genomic and expression analyses of Tursiops truncatus T cell receptor gamma (TRG) and alpha/delta (TRA/TRD) loci reveal a similar basic public γδ repertoire in dolphin and human, «BMC GENOMICS», 2016, 17, Article number: 634, pp. 634 - 634 [articolo]
Savojardo, Castrense; Fariselli, Piero; Martelli, Pier Luigi; Casadio, Rita, INPS-MD: A web server to predict stability of protein variants from sequence and structure, «BIOINFORMATICS», 2016, 32, pp. 2542 - 2544 [articolo]
Luca Fontanesi; Federica Di Palma; Paul Flicek; Andrew T. Smith; Carl-Gustaf Thulin; Paulo C. Alves; the Lagomorph Genomics Consortium: [..; Rita Casadio; Pier Luigi Martelli; Anisa Ribani; Giuseppina Schiavo; Valerio Joe Utzeri; ..], LaGomiCs-Lagomorph Genomics Consortium: An International Collaborative Effort for Sequencing the Genomes of an Entire Mammalian Order, «JOURNAL OF HEREDITY», 2016, 107, pp. 295 - 308 [articolo]
Martelli, Pier Luigi; Fariselli, Piero; Savojardo, Castrense; Babbi, Giulia; Aggazio, Francesco; Casadio, Rita, Large scale analysis of protein stability in OMIM disease related human protein variants, «BMC GENOMICS», 2016, 17, Article number: 397, pp. 239 - 247 [articolo]
Bovo, Samuele; Di Lena, Pietro; Martelli, Pier Luigi; Fariselli, Piero; Casadio, Rita, NET-GE, 2016. [software]
Bovo, Samuele; Di Lena, Pietro; Martelli, Pier Luigi; Fariselli, Piero; Casadio, Rita, NET-GE: a web-server for linking protein variations to biological processes and pathways, in: Proceedings NGS 2016: Genome Annotation, 2016, pp. 55 - 56 (atti di: NGS 2016, Barcellona, Spain, April 4-6, 2016) [atti di convegno-abstract]
