SAVOJARDO, CASTRENSE; FARISELLI, PIERO; Alhamdoosh M.; MARTELLI, PIER LUIGI; PIERLEONI, ANDREA; CASADIO, RITA, DisLocate is a web server for predicting cisteine bonding state and disulfide connectivity in proteins., 2011. [software]
Pippucci T.; Benelli M.; Magi A.; Martelli P.L.; Magini P.; Torricelli F.; Casadio R.; Seri M.; Romeo G., EX-HOM (EXome-HOMozygosity): a proof of principle, «HUMAN HEREDITY», 2011, 72, pp. 45 - 53 [articolo]
V. Indio; G. Tasco; P.L. Martelli; R Casadio; M. A. Pantaleo; A. Astolfi; S. Formica; P. Paterini; G. Biasco, Identification of protein variants in gastrointestinal stromal tumor KIT/PDGFRA wild type (WT GISTs) with RNA massively parallel sequencing and computational analysis, in: Proceedings of the 36th FEBS Congress, Biochemistry for Tomorrow's Medicine, «THE FEBS JOURNAL», 2011, 278 Suppl S1, pp. 252 - 252 (atti di: 36th FEBS Congress, Biochemistry for Tomorrow's Medicine, Torino, 25-30/6/2011) [atti di convegno-abstract]
M. A. Pantaleo; A. Astolfi; V. Indio; P. Paterini; S. Formica; R. Casadio; P. Martelli; A. Maleddu; M. Nannini; A. P. Dei Tos; M. C. Heinrich; D. Santini; F. Catena; C. Ceccarelli; M. Fiorentino; M. di Battista; R. Moore; N. Thiessen; C. Gnocchi; G. Biasco, Identification of SDHA (subunit A of the succinate dehydrogenase) mutations in KIT/PDGFRA WT gastrointestinal stromal tumors (GISTs)., in: Proceedings of the 2011 ASCO annual meeting, «JOURNAL OF CLINICAL ONCOLOGY», 2011, 29, Suppl, pp. . - . (atti di: ASCO Annual Meeting 2011, Chicago (USA), 4-8/6/2011) [atti di convegno-abstract]
Savojardo C.; Fariselli P.; Alhamdoosh M.; Martelli P.L.; Pierleoni A.; Casadio R., Improving the prediction of disulfide bonds in Eukaryotes with machine learning methods and protein subcellular localization, «BIOINFORMATICS», 2011, 27, pp. 2224 - 2230 [articolo]
Savojardo Castrense;Fariselli Piero; Piovesan Damiano; Martelli Pier Luigi; Casadio Rita, ISPRED2: A machine-learning method to predict protein interaction sites, in: Proceedings CIBB2011, 2011, pp. . - . (atti di: 8th INTERNATIONAL MEETING ON COMPUTATIONAL INTELLIGENCE METHODS FOR BIOINFORMATICS AND BIOSTATISTICS, Gargnano-Lago di Garda (IT), 30/6-2/7/2012) [atti di convegno-abstract]
Pierleoni A.; Martelli P.L.; Casadio R., MemLoci: predicting subcellular localization of membrane proteins in Eukaryotes, «BIOINFORMATICS», 2011, 27, pp. 1224 - 1230 [articolo]
Andrea Pierleoni; Valentina Indio; Castrense Savojardo; Piero Fariselli; Pier Luigi Martelli; Rita Casadio, MemPype: a pipeline for the annotation of eukaryotic membrane proteins, 2011. [software]
Pierleoni A.; Indio V.; Savojardo C.; Fariselli P.; Martelli P.L.; Casadio R., MemPype: a pipeline for the annotation of eukaryotic membrane proteins, «NUCLEIC ACIDS RESEARCH», 2011, 39, pp. W375 - W380 [articolo]
Savojardo C. ; Fariselli P.; Martelli PL ; Shukla P. ; Casadio R., Prediction of the bonding state of cysteine residues in proteins with machine-learning methods, in: Computational Intelligence Methods for Bioinformatics and Biostatistics. 7th International Meeting, CIBB 2010 Palermo, Italy, September 16-18, 2010 Revised Selected Papers, Berlin, Springer, 2011, pp. 98 - 111 (LECTURE NOTES IN COMPUTER SCIENCE) [capitolo di libro]
Pantaleo M.A.; Astolfi A.; Indio V.; Moore R.; Thiessen N.; Heinrich M.C.; Gnocchi C.; Santini D.; Catena F.; Formica S.; Martelli P.L.; Casadio R.; Pession A.; Biasco G., SDHA Loss-of-Function Mutations in KIT-PDGFRA Wild-Type Gastrointestinal Stromal Tumors Identified by Massively Parallel Sequencing, «JOURNAL OF THE NATIONAL CANCER INSTITUTE», 2011, 103, pp. 983 - 987 [articolo]
Fontanesi L. ; Beretti F.; Riggio V.; Dall'Olio S.; Occidente M.; Incoronato C.; Martelli P.L.; Casadio R.; Portolano B.; Matassino D.; Russo V., A Comparative Analysis of Copy Number Variation of the Sheep and Goat Genomes, in: Proceedings of the 9th World Congress on Genetics Applied to Livestock Production, s.l, s.n, 2010, 9, pp. 696 - 696 (atti di: 9th World Congress on Genetics Applied to Livestock Production, Leipzig, Germany, 1-6 August 2010) [Contributo in Atti di convegno]
Fontanesi L.; Martelli P.L.; Beretti F.; Riggio V.; Dall'Olio S.; Colombo M.; Casadio R.; Russo V.; Portolano B., An initial comparative map of copy number variations in the goat (Capra hircus) genome, «BMC GENOMICS», 2010, 11, Article number: 639, pp. 1 - 15 [articolo]Open Access
Casadio R.; Fariselli P.; Martelli P.L., Computational biology and bioinformatics for the life science at the Bologna biocomputing group, in: Actos del VI Congreso Interdisciplinario de Investigacion Cientìfica, SANTO DOMINGO, MESCYT, 2010, pp. 42 - 42 (atti di: VI Congreso Interdisciplinario de Investigacion Cientìfica, Santo Domingo (Republica Dominicana), 10-11 June 2010) [atti di convegno-abstract]
Piovesan D.; Bartoli L.; Martelli P.L.; Fariselli P.; Rossi I.; Guerzoni G.; Donvito G.; Maggi G.P.; Casadio R., Extended and robust protein sequence annotation over conservative non hierarchical clusters. The Bologna Annotation Resource v 2.0, in: Proceedings of 14th International Biotechnology Symposium and Exhibition, s.l, s.n, 2010, pp. S15 - S15 (atti di: IBS 2010 - 14th International Biotechnology Symposium and Exhibition, Rimini, 14-18 September 2010) [atti di convegno-abstract]
