Foto del docente

Emanuele Paci

Professore associato

Dipartimento di Fisica e Astronomia "Augusto Righi"

Settore scientifico disciplinare: FIS/07 FISICA APPLICATA (A BENI CULTURALI, AMBIENTALI, BIOLOGIA E MEDICINA)

Pubblicazioni

Skinner S.P.; Radou G.; Tuma R.; Houwing-Duistermaat J.J.; Paci E., Estimating Constraints for Protection Factors from HDX-MS Data, «BIOPHYSICAL JOURNAL», 2019, 116, pp. 1194 - 1203 [articolo]

Lepsik M.; Sommer R.; Kuhaudomlarp S.; Lelimousin M.; Paci E.; Varrot A.; Titz A.; Imberty A., Induction of rare conformation of oligosaccharide by binding to calcium-dependent bacterial lectin: X-ray crystallography and modelling study, «EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY», 2019, 177, pp. 212 - 220 [articolo]

Santiago C.G.; Paci E.; Donnelly D., A mechanism for agonist activation of the glucagon-like Peptide-1 (GLP-1) receptor through modelling & molecular dynamics, «BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS», 2018, 498, pp. 359 - 365 [articolo]

Radom F.; Pluckthun A.; Paci E., Assessment of ab initio models of protein complexes by molecular dynamics, «PLOS COMPUTATIONAL BIOLOGY», 2018, 14, Article number: e1006182, pp. 1 - 10 [articolo]Open Access

Batchelor M.; Paci E., Helical Polyampholyte Sequences Have Unique Thermodynamic Properties, «JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL», 2018, 122, pp. 11784 - 11791 [articolo]

Wolny M.; Batchelor M.; Bartlett G.J.; Baker E.G.; Kurzawa M.; Knight P.J.; Dougan L.; Woolfson D.N.; Paci E.; Peckham M., Characterization of long and stable de novo single alpha-helix domains provides novel insight into their stability, «SCIENTIFIC REPORTS», 2017, 7, Article number: 44341, pp. 1 - 14 [articolo]Open Access

Hickman S.J.; Cooper R.E.M.; Bellucci L.; Paci E.; Brockwell D.J., Gating of TonB-dependent transporters by substrate-specific forced remodelling, «NATURE COMMUNICATIONS», 2017, 8, Article number: 14804, pp. 1 - 12 [articolo]Open Access

Gowdy J.; Batchelor M.; Neelov I.; Paci E., Nonexponential Kinetics of Loop Formation in Proteins and Peptides: A Signature of Rugged Free Energy Landscapes?, «JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL», 2017, 121, pp. 9518 - 9525 [articolo]

O'Connor M.; Paci E.; McIntosh-Smith S.; Glowacki D.R., Adaptive free energy sampling in multidimensional collective variable space using boxed molecular dynamics, «FARADAY DISCUSSIONS», 2016, 195, pp. 395 - 419 [articolo]

Papachristos K.; Muench S.P.; Paci E., Characterization of the flexibility of the peripheral stalk of prokaryotic rotary A-ATPases by atomistic simulations, «PROTEINS», 2016, 84, pp. 1203 - 1212 [articolo]

Tych K.M.; Batchelor M.; Hoffmann T.; Wilson M.C.; Hughes M.L.; Paci E.; Brockwell D.J.; Dougan L., Differential Effects of Hydrophobic Core Packing Residues for Thermodynamic and Mechanical Stability of a Hyperthermophilic Protein, «LANGMUIR», 2016, 32, pp. 7392 - 7402 [articolo]

Gruszka D.T.; Mendonca C.A.T.F.; Paci E.; Whelan F.; Hawkhead J.; Potts J.R.; Clarke J., Disorder drives cooperative folding in a multidomain protein, «PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA», 2016, 113, pp. 11841 - 11846 [articolo]

Tych K.M.; Batchelor M.; Hoffmann T.; Wilson M.C.; Paci E.; Brockwell D.J.; Dougan L., Tuning protein mechanics through an ionic cluster graft from an extremophilic protein, «SOFT MATTER», 2016, 12, pp. 2688 - 2699 [articolo]

Gruszka D.T.; Whelan F.; Farrance O.E.; Fung H.K.H.; Paci E.; Jeffries C.M.; Svergun D.I.; Baldock C.; Baumann C.G.; Brockwell D.J.; Potts J.R.; Clarke J., Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein, «NATURE COMMUNICATIONS», 2015, 6, Article number: 7271, pp. 1 - 9 [articolo]Open Access

Batchelor M.; Gowdy J.; Paci E., Effect of external pulling forces on the length distribution of peptides, «BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS», 2015, 1850, pp. 903 - 910 [articolo]

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