Rocchi, Ettore; Magnani, Federico; Castellani, Gastone; Carusillo, Antonio; Tarozzi, Martina, CATS: a bioinformatic tool for automated Cas9 nucleases activity comparison in clinically relevant contexts, «FRONTIERS IN GENOME EDITING», 2025, 7, Article number: 1571023 , pp. 1 - 11 [Scientific article]Open Access
Zampini, M.; Riva, E.; Lanino, L.; Sauta, E.; Antunes Dos Reis, R.; Ejarque, R. M. A.; Maggioni, G.; Termanini, A.; Merlotti, A.; Campagna, A.; Dall'Olio, L.; Kulasekararaj, A.; Calvi, M.; Di Vito, C.; Bonometti, A.; Rahal, D.; Croci, G.; Boveri, E.; Gianelli, U.; Ponzoni, M.; Caselli, R.; Albertazzi, S.; Todisco, G.; Ubezio, M.; Crisafulli, L.; Frigo, A.; Lugli, E.; Mosca, E.; Acha, P.; Ghisletti, S.; Nicassio, F.; Santoro, A.; Diez-Campelo, M.; Sole, F.; Ades, L.; Platzbecker, U.; Santini, V.; Fenaux, P.; Haferlach, T.; Sallman, D.; Garcia-Manero, G.; Mavilio, D.; Remondini, D.; Castellani, G.; D'Amico, S.; Zeidan, A. M.; Komrokji, R.; Kordasti, S.; Ficara, F.; Della Porta, M. G.; Russo, A.; Travaglino, E.; Delleani, M.; Asti, G.; Ventura, D.; Tentori, C. A.; Buizza, A.; Brindisi, M.; Pinocchio, N.; Pesce, F., Characterization and Clinical Implications of p53 Dysfunction in Patients With Myelodysplastic Syndromes, «JOURNAL OF CLINICAL ONCOLOGY», 2025, 43, pp. 2069 - 2083 [Scientific article]Open Access
Kwiatkowska, Katarzyna Malgorzata; Martinelli, Nicola; Bertamini, Luca; De Fanti, Sara; Olivieri, Oliviero; Sala, Claudia; Castellani, Gastone; Xumerle, Luciano; Zago, Elisa; Busti, Fabiana; Giuliani, Cristina; Garagnani, Paolo; Girelli, Domenico, Clonal hematopoiesis in cardiovascular aging: Insights from the verona heart study, «GEROSCIENCE», 2025, 47, pp. 2149 - 2157 [Scientific article]Open Access
Piccinini, Filippo; Tritto, Michele; Pyun, Jae-Chul; Lee, Misu; Kwak, Bongseop; Ku, Bosung; Normanno, Nicola; Castellani, Gastone, ColorI-DT: An open-source tool for the quantitative evaluation of differences in microscopy color images, «COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL», 2025, 27, pp. 2526 - 2536 [Scientific article]Open Access
Piccinini, Filippo; Tazzari, Marcella; Tumedei, MARIA MADDALENA; Normanno, Nicola; Castellani, Gastone; Carbonaro, Antonella, Comparative Evaluation of Commercial, Freely Available, and Open-Source Tools for Single-Cell Analysis Within Freehand-Defined Histological Brightfield Image Regions of Interest, «TECHNOLOGIES», 2025, 13, Article number: 110 , pp. 1 - 19 [Scientific article]Open Access
Giacometti, Tommaso; Curti, Nico; Zaghi, Adriano; Remondini, Daniel; Castellani, Gastone, Flow-Based Synthetic Data Generation: A Unified Approach for Biomedical Tasks, in: Artificial Intelligence for Biomedical Data, 2025, pp. 149 - 156 (atti di: 1st Workshop on Artificial Intelligence for Biomedical Data (AIBio 2025), Bologna, Italy, 25-26 October 2025) [Contribution to conference proceedings]
Curti, Nico; Carlini, Gianluca; Valente, Sabrina; Giampieri, Enrico; Merlotti, Alessandra; Remondini, Daniel; La Manna, Gaetano; Castellani, Gastone; Pasquinelli, Gianandrea, Glomerular basement membrane thickness estimation and stratification via active semi-supervised learning model, «AMERICAN JOURNAL OF NEPHROLOGY», 2025, 56, pp. 737 - 750 [Scientific article]Open Access
Kwiatkowska, Katarzyna Malgorzata; Garagnani, Paolo; Bonafé, Massimiliano; Bacalini, Maria G.; Sala, Claudia; Castellani, Gastone; Gentilini, Davide; Calzari, Luciano; Ziegler, Dan; Gerrits, Monique M.; Faber, Catharina G.; Malik, Rayaz A.; Marchi, Margherita; Salvi, Erika; Lauria, Giuseppe; Pirazzini, Chiara, High-resolution whole-genome DNA methylation revealed unique signatures of painful diabetic neuropathy, «DIABETES», 2025, 74, pp. 640 - 650 [Scientific article]Open Access
Durazzi, Francesco; Lunedei, Enrico; Colombini, Giulio; Gatti, Giulia; Sambri, Vittorio; De Cesare, Alessandra; Crippa, Cecilia; Pasquali, Frederique; Castellani, Gastone; Remondini, Daniel; Bazzani, Armando, Human mobility and sewage data correlate with COVID-19 epidemic evolution in a 3-year surveillance of the metropolitan area of Bologna, «BMC INFECTIOUS DISEASES», 2025, 25, Article number: 1467 , pp. 1 - 13 [Scientific article]Open Access
Dalmonte, Sara; Cocozza, Maria Adriana; Cuicchi, Dajana; Remondini, Daniel; Faggioni, Lorenzo; Castellucci, Paolo; Farolfi, Andrea; Fortunati, Emilia; Cappelli, Alberta; Biondi, Riccardo; Cattabriga, Arrigo; Poggioli, Gilberto; Fanti, Stefano; Castellani, Gastone; Coppola, Francesca; Curti, Nico, Identification of PET/CT radiomic signature for classification of locally recurrent rectal cancer: A network-based feature selection approach, «HELIYON», 2025, 11, Article number: e41404 , pp. 1 - 11 [Scientific article]Open Access
Valente, Sabrina; Curti, Nico; Carlini, Gianluca; Giampieri, Enrico; Merlotti, Alessandra; Remondini, Daniel; La Manna, Gaetano; Castellani, Gastone; Pasquinelli, Gianandrea, Improving Diagnostic Accuracy in Glomerular Diseases with AI-Based GBM Thickness Assessment, in: NA, 2025, pp. 1 - 1 (atti di: 4th Meeting SIRTEPS: Fostering Globally Competitive Translational Research, Ventotene (LT), 8 – 10 Giugno 2025) [Abstract]
Giacometti, Tommaso; Rocchi, Ettore; Cojutti, Pier Giorgio; Magnani, Federico; Remondini, Daniel; Pea, Federico; Castellani, Gastone, Leveraging Neural ODEs for Population Pharmacokinetics of Dalbavancin in Sparse Clinical Data, «ENTROPY», 2025, 27, Article number: 602 , pp. 1 - 16 [Scientific article]Open Access
Mosquera Orgueira, A.; Gonzalez Perez, M. S.; D'Agostino, M.; Cairns, D. A.; Larocca, A.; Palacios, J. J. L.; Wester, R.; Bertsch, U.; Waage, A.; Zamagni, E.; Perez Miguez, C.; Rojas Martinez, J. A.; Mai, E. K.; Crucitti, D.; Salwender, H.; Dall'Olio, D.; Castellani, G.; Pineiro Fiel, M.; Bringhen, S.; Zweegman, S.; Cavo, M.; Iqbal, S.; Hernandez Rivas, J. M.; Bruno, B.; Cook, G.; Kaiser, M. F.; Goldschmidt, H.; Van De Donk, N. W. C. J.; Jackson, G.; San-Miguel, J. F.; Boccadoro, M.; Mateos, M. -V.; Sonneveld, P., Machine learning risk stratification strategy for multiple myeloma: Insights from the EMN–HARMONY Alliance platform, «HEMASPHERE», 2025, 9, Article number: e70228 , pp. 1 - 1 [Scientific article]
Veronesi, Giulia; Curti, Nico; Gardini, Aldo; Querzoli, Giulia; Castellani, Gastone; Dika, Emi, Machine learning to detect melanoma exploiting nuclei morphology and Spatial organization, «SCIENTIFIC REPORTS», 2025, 15, Article number: 21594 , pp. 1 - 11 [Scientific article]Open Access
Campagna, A; Clasen, F; Garcia-Guevara, F; Zampini, M; Ficara, F; Crisafulli, L; Brindisi, M; Martano, G; Saba, E; Ubezio, M; Russo, A; Portlock, T; Todisco, G; Maggioni, G; Lanino, L; Buizza, A; Pinocchio, N; Ventura, D; Ferrari, I; Torre, E; Dos Reis, Ra; Rocchi, E; Castellani, G; Uhlen, M; Harrison, C; Kordasti, S; Della Porta, Mg; Shoaie, S, Predictive Value of Microbiome and Metabolomic Biomarkers in Myeloid Neoplasms, in: Proceedings of the Society of Hematologic Oncology 2025 Annual Meeting, 3500 MAPLE AVENUE, STE 750, DALLAS, TX 75219-3931 USA, CIG MEDIA GROUP, LP, «CLINICAL LYMPHOMA MYELOMA & LEUKEMIA», 2025, 25(atti di: Society of Hematologic Oncology Thirteenth Annual Meeting, Houston, Texas, September 3-6, 2025) [Poster]
