Savojardo, Castrense; Martelli, Pier Luigi; Fariselli, Piero; Casadio, Rita, SChloro: directing Viridiplantae proteins to six chloroplastic sub-compartments, «BIOINFORMATICS», 2017, 33, pp. 347 - 353 [Scientific article]
Babbi, Giulia; Martelli, Pier Luigi; Profiti, Giuseppe; Bovo, Samuele; Savojardo, Castrense; Casadio, Rita, The eDGAR database of Disease-Gene Associations with annotated Relationships among genes, 2017. [Database]
Gregory Neils Puncher, Alessia Cariani, Elisabetta Cilli, Francesco Massari, Castrense Savojardo, Sara De Fanti, Agostino Leone, Pier Luigi Martelli, Andrea Luchetti, Barbara Mantovani, Rita Casadio, Arturo Morales, Vedat Onar, Nezir Yaşar Toker, Tom Moens, Fausto Tinti, The impact of fisheries on bluefin tuna (Thunnus thynnus) over two millennia (2nd century BC – 20th century AD): Genetic and genomic analyses of ancient tuna remains from the Mediterranean, Atlantic, and Black Seas, in: Fish and Fishing Communities. Understanding Ancient and Modern Fisheries through Archaeological Fish Remains, 2017, pp. 44 - 45 (atti di: ICAZ 19 FRWG, Fish and Fishing Communities. Understanding Ancient and Modern Fisheries through Archaeological Fish Remains, Stintino e Alghero, 1-7 Ottobre 2017) [Abstract]
Savojardo, Castrense; Fariselli, Piero; Martelli, Pier Luigi; Casadio, Rita, INPS-MD: A web server to predict stability of protein variants from sequence and structure, «BIOINFORMATICS», 2016, 32, pp. 2542 - 2544 [Scientific article]
Martelli, Pier Luigi; Fariselli, Piero; Savojardo, Castrense; Babbi, Giulia; Aggazio, Francesco; Casadio, Rita, Large scale analysis of protein stability in OMIM disease related human protein variants, «BMC GENOMICS», 2016, 17, Article number: 397 , pp. 239 - 247 [Scientific article]
Martelli, Pier Luigi; Savojardo, Castrense; Fariselli, Piero; Tasco, Gianluca; Casadio, Rita, Computer-based prediction of mitochondria-targeting peptides, in: Mitochondrial Medicine, New York, Springer New York, 2015, pp. 305 - 320 (METHODS IN MOLECULAR BIOLOGY) [Chapter or essay]
Fariselli, Piero; Martelli, Pier Luigi; Savojardo, Castrense; Casadio, Rita, INPS: predicting the impact of non-synonymous variations on protein stability from sequence, «BIOINFORMATICS», 2015, 31, pp. 2816 - 2821 [Scientific article]Open Access
Savojardo, Castrense; Martelli, Pier Luigi; Fariselli, Piero; Casadio, Rita, TPpred3 detects and discriminates mitochondrial and chloroplastic targeting peptides in eukaryotic proteins, «BIOINFORMATICS», 2015, 31, pp. 3269 - 3275 [Scientific article]
Pier Luigi Martelli; Castrense Savojardo; Piero Fariselli; Gianluca Tasco ; Rita Casadio, Computer-based prediction of mitochondrial-targeting peptides, in: Mitochondrial Medicine, Berlin, Springer, 2014, pp. x - x (METHODS IN MOLECULAR BIOLOGY) [Chapter or essay]
Castrense Savojardo; Pier Luigi Martelli; Piero Fariselli; Rita Casadio, TPpred2: improving the prediction of mitochondrial targeting peptide cleavage sites by exploiting sequence motifs, «BIOINFORMATICS», 2014, 30, Article number: btu411 , pp. 2973 - 2974 [Scientific article]
C. Savojardo;P. Fariselli;P. L. Martelli;R. Casadio, BCov: a method for predicting beta-sheet topology using sparse inverse covariance estimation and integer programming, «BIOINFORMATICS», 2013, 29, pp. 3151 - 3157 [Scientific article]
Savojardo C;Fariselli P;Casadio R, BETAWARE: a machine-learning tool to detect and predict transmembrane beta-barrel proteins in prokaryotes., «BIOINFORMATICS», 2013, 29, pp. 504 - 505 [Scientific article]
Savojardo C;Fariselli P;Martelli PL;Casadio R, Prediction of disulfide connectivity in proteins with machine-learning methods and correlated mutations., «BMC BIOINFORMATICS», 2013, 14, Article number: S10 , pp. . - . [Scientific article]
Indio V;Martelli PL;Savojardo C;Fariselli P;Casadio R, The prediction of organelle-targeting peptides in eukaryotic proteins with Grammatical-Restrained Hidden Conditional Random Fields., «BIOINFORMATICS», 2013, 29, pp. 981 - 988 [Scientific article]
Martelli P; Indio V; Savojardo C; Fariselli P; Casadio R, The prediction of signal peptides in proteins with Grammatical Restrained Hidden Conditional Random Fields, in: Proceedings of the 57th national meeting of the Italian Society of Biochemistry and Molecular Biology, sl, sn, 2013, pp. X - X (atti di: 57th national meeting of the Italian Society of Biochemistry and Molecular Biology, Ferrara, 18-20/9/2013) [Abstract]
